How do disease control mesures impact spatial predictions of schistosomiasis and hookworm? The example of prediciting school-based prevalence before and after preventative chemotherapy in Ghana

Kulinkina, Alexandra V., Farnham, Andrea, Biritwum, Nana-Kwadwo, Utzinger, Juerg and Walz, Yvonne, (2023). How do disease control mesures impact spatial predictions of schistosomiasis and hookworm? The example of prediciting school-based prevalence before and after preventative chemotherapy in Ghana. PLOS Neglected Tropical Diseases, 1-18

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  • Sub-type Journal article
    Author Kulinkina, Alexandra V.
    Farnham, Andrea
    Biritwum, Nana-Kwadwo
    Utzinger, Juerg
    Walz, Yvonne
    Title How do disease control mesures impact spatial predictions of schistosomiasis and hookworm? The example of prediciting school-based prevalence before and after preventative chemotherapy in Ghana
    Appearing in PLOS Neglected Tropical Diseases
    Publication Date 2023-06-16
    Place of Publication San Francisco
    Publisher PLOS
    Start page 1
    End page 18
    Language eng
    Abstract Schistosomiasis and soil-transmitted helminth infections are among the neglected tropical diseases (NTDs) affecting primarily marginalized communities in low- and middle-income countries. Surveillance data for NTDs are typically sparse, and hence, geospatial predictive modeling based on remotely sensed (RS) environmental data is widely used to characterize disease transmission and treatment needs. However, as large-scale preventive chemotherapy has become a widespread practice, resulting in reduced prevalence and intensity of infection, the validity and relevance of these models should be re-assessed. We employed two nationally representative school-based prevalence surveys of Schistosoma haematobium and hookworm infections from Ghana conducted before (2008) and after (2015) the introduction of large-scale preventive chemotherapy. We derived environmental variables from fine-resolution RS data (Landsat 8) and examined a variable distance radius (1–5 km) for aggregating these variables around point-prevalence locations in a nonparametric random forest modeling approach. We used partial dependence and individual conditional expectation plots to improve interpretability of results. The average school-level S. haematobium prevalence decreased from 23.8% to 3.6% and that of hookworm from 8.6% to 3.1% between 2008 and 2015. However, hotspots of highprevalence locations persisted for both infections. The models with environmental data extracted from a buffer radius of 2–3 km around the school location where prevalence was measured had the best performance. Model performance (according to the R2 value) was already low and declined further from approximately 0.4 in 2008 to 0.1 in 2015 for S. haematobium and from approximately 0.3 to 0.2 for hookworm. According to the 2008 models, land surface temperature (LST), modified normalized difference water index, elevation, slope, and streams variables were associated with S. haematobium prevalence. LST, slope, and improved water coverage were associated with hookworm prevalence. Associations with the environment in 2015 could not be evaluated due to low model performance. Our study showed that in the era of preventive chemotherapy, associations between S. haematobium and hookworm infections and the environment weakened, and thus predictive power of environmental models declined. In light of these observations, it is timely to develop new cost-effective passive surveillance methods for NTDs as an alternative to costly surveys, and to focus on persisting hotspots of infection with additional interventions to reduce reinfection. We further question the broad application of RS-based modeling for environmental diseases for which large-scale pharmaceutical interventions are in place
    UNBIS Thesaurus GHANA
    Keyword Schistosoma haematobium
    Hookworms
    Medical risk factors
    Helminth infections
    Chemotherapy
    Neglected tropical diseases
    Schostomiasis
    Copyright Holder The Authors
    Copyright Year 2023
    Copyright type Creative commons
    DOI 10.1371/journal.pntd.0011424
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    Created: Mon, 22 Jan 2024, 17:26:21 JST by Aarti Basnyat on behalf of UNU EHS